IL_9J1M_094

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CG*CACG

Length

6 nucleotides

Bulged bases

9J1M|1|A|A|2810, 9J1M|1|A|C|2811

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9J1M_094 not in the Motif Atlas

Geometric match to IL_5J7L_341

Geometric discrepancy: 0.0725

The information below is about IL_5J7L_341

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

9J1M|1|A|C|2750
9J1M|1|A|G|2751
*
9J1M|1|A|C|2809
9J1M|1|A|A|2810
9J1M|1|A|C|2811
9J1M|1|A|G|2812

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

Large ribosomal subunit protein uL3

Chain J

Large ribosomal subunit protein uL13