IL_9J1M_101

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

UU*ACCG

Length

6 nucleotides

Bulged bases

9J1M|1|A|C|2950, 9J1M|1|A|C|2951

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9J1M_101 not in the Motif Atlas

Geometric match to IL_5J7L_349

Geometric discrepancy: 0.0544

The information below is about IL_5J7L_349

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

9J1M|1|A|U|2933
9J1M|1|A|U|2934
*
9J1M|1|A|A|2949
9J1M|1|A|C|2950
9J1M|1|A|C|2951
9J1M|1|A|G|2952

Current chains

Chain A

23S rRNA

Nearby chains

Chain N

Large ribosomal subunit protein bL17

Chain P

Large ribosomal subunit protein bL19