IL_9J1M_124

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

UUGU*AG

Length

6 nucleotides

Bulged bases

9J1M|1|a|G|250

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9J1M_124 not in the Motif Atlas

Geometric match to IL_4LFB_012

Geometric discrepancy: 0.2075

The information below is about IL_4LFB_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22002.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

3

Unit IDs

9J1M|1|a|U|248
9J1M|1|a|U|249
9J1M|1|a|G|250
9J1M|1|a|U|251
*
9J1M|1|a|A|273
9J1M|1|a|G|274

Current chains

Chain a

16S rRNA

Nearby chains

Chain q

Small ribosomal subunit protein uS17