IL_9J3T_104

3D structure

PDB id

9J3T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Enterococcus faecalis ROOL RNA octamer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UGCAGG*CUGUAAA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9J3T|1|H|U|184
9J3T|1|H|G|185
9J3T|1|H|C|186
9J3T|1|H|A|187
9J3T|1|H|G|188
9J3T|1|H|G|189
*
9J3T|1|H|C|531
9J3T|1|H|U|532
9J3T|1|H|G|533
9J3T|1|H|U|534
9J3T|1|H|A|535
9J3T|1|H|A|536
9J3T|1|H|A|537

Current chains

Chain H

RNA (580-MER)

Nearby chains

Chain C

ROOL RNA