IL_9J8P_003
3D structure
- PDB id
- 9J8P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of human TUT1 complexed with U6 snRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.21 Å
Loop
- Sequence
- GAUACAGAGAAGAUUAG*CAAAUUCGUGAAGC
- Length
- 31 nucleotides
- Bulged bases
- 9J8P|1|B|A|43, 9J8P|1|B|G|49, 9J8P|1|B|A|50, 9J8P|1|B|U|51, 9J8P|1|B|A|84, 9J8P|1|B|A|92
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9J8P|1|B|G|38
9J8P|1|B|A|39
9J8P|1|B|U|40
9J8P|1|B|A|41
9J8P|1|B|C|42
9J8P|1|B|A|43
9J8P|1|B|G|44
9J8P|1|B|A|45
9J8P|1|B|G|46
9J8P|1|B|A|47
9J8P|1|B|A|48
9J8P|1|B|G|49
9J8P|1|B|A|50
9J8P|1|B|U|51
9J8P|1|B|U|52
9J8P|1|B|A|53
9J8P|1|B|G|54
*
9J8P|1|B|C|81
9J8P|1|B|A|82
9J8P|1|B|A|83
9J8P|1|B|A|84
9J8P|1|B|U|85
9J8P|1|B|U|86
9J8P|1|B|C|87
9J8P|1|B|G|88
9J8P|1|B|U|89
9J8P|1|B|G|90
9J8P|1|B|A|91
9J8P|1|B|A|92
9J8P|1|B|G|93
9J8P|1|B|C|94
Current chains
- Chain B
- U6 snRNA
Nearby chains
- Chain A
- Speckle targeted PIP5K1A-regulated poly(A) polymerase
Coloring options: