IL_9J8P_005

3D structure

PDB id

9J8P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human TUT1 complexed with U6 snRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.21 Å

Loop

Sequence

GGC*GAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9J8P_005 not in the Motif Atlas

Geometric match to IL_3CUL_008

Geometric discrepancy: 0.2349

The information below is about IL_3CUL_008

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.6

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

241

Unit IDs

9J8P|1|B|G|58
9J8P|1|B|G|59
9J8P|1|B|C|60
*
9J8P|1|B|G|75
9J8P|1|B|A|76
9J8P|1|B|C|77

Current chains

Chain B

U6 snRNA

Nearby chains

Chain A

Speckle targeted PIP5K1A-regulated poly(A) polymerase