IL_9JPO_044

3D structure

PDB id

9JPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Lys(mcm5h2U34) and mRNA(AAA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.18 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

9JPO|1|A|U|1030, 9JPO|1|A|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JPO|1|A|G|1003
9JPO|1|A|A|1004
9JPO|1|A|A|1005
9JPO|1|A|G|1006
*
9JPO|1|A|U|1023
9JPO|1|A|G|1024
9JPO|1|A|U|1025
9JPO|1|A|G|1026
9JPO|1|A|C|1027
9JPO|1|A|C|1028
9JPO|1|A|U|1029
9JPO|1|A|U|1030
9JPO|1|A|C|1031
9JPO|1|A|G|1032
9JPO|1|A|G|1033
9JPO|1|A|G|1034
9JPO|1|A|A|1035
9JPO|1|A|A|1036
9JPO|1|A|C|1037

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S14