IL_9K0Z_012

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

UG*CUG

Length

5 nucleotides

Bulged bases

9K0Z|1|A|U|200

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9K0Z_012 not in the Motif Atlas

Geometric match to IL_9E6Q_041

Geometric discrepancy: 0.3683

The information below is about IL_9E6Q_041

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_97561.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

170

Unit IDs

9K0Z|1|A|U|187
9K0Z|1|A|G|188
*
9K0Z|1|A|C|199
9K0Z|1|A|U|200
9K0Z|1|A|G|201

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain Q

Small ribosomal subunit protein uS17