IL_9K0Z_029

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

UGAAAAC*GCGUG

Length

12 nucleotides

Bulged bases

9K0Z|1|A|U|612

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K0Z|1|A|U|585
9K0Z|1|A|G|586
9K0Z|1|A|A|587
9K0Z|1|A|A|588
9K0Z|1|A|A|589
9K0Z|1|A|A|590
9K0Z|1|A|C|591
*
9K0Z|1|A|G|609
9K0Z|1|A|C|610
9K0Z|1|A|G|611
9K0Z|1|A|U|612
9K0Z|1|A|G|613

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain H

Small ribosomal subunit protein uS8

Chain P

Small ribosomal subunit protein bS16

Chain Q

Small ribosomal subunit protein uS17