IL_9K0Z_046
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 9K0Z|1|A|C|1034
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9K0Z_046 not in the Motif Atlas
- Geometric match to IL_4LFB_044
- Geometric discrepancy: 0.0675
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_82453.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
9K0Z|1|A|U|1032
9K0Z|1|A|G|1033
9K0Z|1|A|C|1034
9K0Z|1|A|A|1035
9K0Z|1|A|U|1036
*
9K0Z|1|A|A|1185
9K0Z|1|A|U|1186
9K0Z|1|A|G|1187
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 4
- mRNA fragment
- Chain 7
- Translation elongation factor EF-G
- Chain C
- Small ribosomal subunit protein uS3
- Chain J
- Small ribosomal subunit protein uS10
- Chain N
- Small ribosomal subunit protein uS14B
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