IL_9K0Z_053

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

UACAAAG*UUUCAAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K0Z|1|A|U|1228
9K0Z|1|A|A|1229
9K0Z|1|A|C|1230
9K0Z|1|A|A|1231
9K0Z|1|A|A|1232
9K0Z|1|A|A|1233
9K0Z|1|A|G|1234
*
9K0Z|1|A|U|1265
9K0Z|1|A|U|1266
9K0Z|1|A|U|1267
9K0Z|1|A|C|1268
9K0Z|1|A|A|1269
9K0Z|1|A|A|1270
9K0Z|1|A|A|1271
9K0Z|1|A|G|1272

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain G

Small ribosomal subunit protein uS7

Chain I

Small ribosomal subunit protein uS9

Chain J

Small ribosomal subunit protein uS10

Chain N

Small ribosomal subunit protein uS14B