IL_9K0Z_058
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GCCC*GUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9K0Z_058 not in the Motif Atlas
- Geometric match to IL_4LFB_068
- Geometric discrepancy: 0.0978
- The information below is about IL_4LFB_068
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_25873.1
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
9K0Z|1|A|G|1384
9K0Z|1|A|C|1385
9K0Z|1|A|C|1386
9K0Z|1|A|C|1387
*
9K0Z|1|A|G|1481
9K0Z|1|A|U|1482
9K0Z|1|A|A|1483
9K0Z|1|A|A|1484
9K0Z|1|A|C|1485
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain 4
- mRNA fragment
- Chain 7
- Translation elongation factor EF-G
- Chain h
- Large subunit ribosomal RNA; LSU rRNA
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