IL_9K0Z_091

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GGG*UC

Length

5 nucleotides

Bulged bases

9K0Z|1|h|G|684

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9K0Z_091 not in the Motif Atlas

Geometric match to IL_9DFE_018

Geometric discrepancy: 0.3878

The information below is about IL_9DFE_018

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

76

Unit IDs

9K0Z|1|h|G|683
9K0Z|1|h|G|684
9K0Z|1|h|G|685
*
9K0Z|1|h|U|780
9K0Z|1|h|C|781

Current chains

Chain h

23S ribosomal RNA

Nearby chains

Chain e

Large ribosomal subunit protein bL35

Chain k

Large ribosomal subunit protein uL4

Chain s

Large ribosomal subunit protein uL15