IL_9K0Z_092
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UUAAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9K0Z_092 not in the Motif Atlas
- Geometric match to IL_7A0S_013
- Geometric discrepancy: 0.1291
- The information below is about IL_7A0S_013
- Detailed Annotation
- AAA cross-strand stack
- Broad Annotation
- AAA cross-strand stack
- Motif group
- IL_66798.3
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
9K0Z|1|h|U|699
9K0Z|1|h|U|700
9K0Z|1|h|A|701
9K0Z|1|h|A|702
9K0Z|1|h|C|703
*
9K0Z|1|h|G|712
9K0Z|1|h|G|713
9K0Z|1|h|U|714
9K0Z|1|h|A|715
9K0Z|1|h|G|716
Current chains
- Chain h
- 23S ribosomal RNA
Nearby chains
- Chain k
- Large ribosomal subunit protein uL4
- Chain s
- Large ribosomal subunit protein uL15
Coloring options: