IL_9K0Z_143
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- ACUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 9K0Z|1|h|G|2216
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9K0Z_143 not in the Motif Atlas
- Geometric match to IL_4WF9_065
- Geometric discrepancy: 0.0782
- The information below is about IL_4WF9_065
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 11
Unit IDs
9K0Z|1|h|A|1887
9K0Z|1|h|C|1888
9K0Z|1|h|U|1889
9K0Z|1|h|C|1890
9K0Z|1|h|G|1891
9K0Z|1|h|G|1892
*
9K0Z|1|h|C|2214
9K0Z|1|h|U|2215
9K0Z|1|h|G|2216
9K0Z|1|h|U|2217
Current chains
- Chain h
- 23S ribosomal RNA
Nearby chains
- Chain j
- Large ribosomal subunit protein uL3
- Chain r
- 50S ribosomal protein L14
Coloring options: