IL_9K10_028

3D structure

PDB id

9K10 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 50S ribosome subunit complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGUUUC*GUCCAAGAG

Length

15 nucleotides

Bulged bases

9K10|1|A|C|1046, 9K10|1|A|G|1049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K10|1|A|U|959
9K10|1|A|G|960
9K10|1|A|U|961
9K10|1|A|U|962
9K10|1|A|U|963
9K10|1|A|C|964
*
9K10|1|A|G|1043
9K10|1|A|U|1044
9K10|1|A|C|1045
9K10|1|A|C|1046
9K10|1|A|A|1047
9K10|1|A|A|1048
9K10|1|A|G|1049
9K10|1|A|A|1050
9K10|1|A|G|1051

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain a

50S ribosomal protein L30