IL_9K10_084

3D structure

PDB id

9K10 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 50S ribosome subunit complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUGUAGGAUAGGU*ACUC

Length

17 nucleotides

Bulged bases

9K10|1|A|U|2334, 9K10|1|A|G|2335, 9K10|1|A|G|2339, 9K10|1|A|U|2341, 9K10|1|A|A|2342

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K10|1|A|G|2333
9K10|1|A|U|2334
9K10|1|A|G|2335
9K10|1|A|U|2336
9K10|1|A|A|2337
9K10|1|A|G|2338
9K10|1|A|G|2339
9K10|1|A|A|2340
9K10|1|A|U|2341
9K10|1|A|A|2342
9K10|1|A|G|2343
9K10|1|A|G|2344
9K10|1|A|U|2345
*
9K10|1|A|A|2399
9K10|1|A|C|2400
9K10|1|A|U|2401
9K10|1|A|C|2402

Current chains

Chain A

23S ribosomal RNA

Nearby chains