IL_9K10_085

3D structure

PDB id

9K10 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 50S ribosome subunit complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGAGA*UCGUUGUUGAAAUAC

Length

20 nucleotides

Bulged bases

9K10|1|A|A|2349, 9K10|1|A|U|2386, 9K10|1|A|U|2387, 9K10|1|A|U|2395

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K10|1|A|G|2347
9K10|1|A|G|2348
9K10|1|A|A|2349
9K10|1|A|G|2350
9K10|1|A|A|2351
*
9K10|1|A|U|2383
9K10|1|A|C|2384
9K10|1|A|G|2385
9K10|1|A|U|2386
9K10|1|A|U|2387
9K10|1|A|G|2388
9K10|1|A|U|2389
9K10|1|A|U|2390
9K10|1|A|G|2391
9K10|1|A|A|2392
9K10|1|A|A|2393
9K10|1|A|A|2394
9K10|1|A|U|2395
9K10|1|A|A|2396
9K10|1|A|C|2397

Current chains

Chain A

23S ribosomal RNA

Nearby chains