IL_9K10_086

3D structure

PDB id

9K10 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 50S ribosome subunit complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

ACUGUGAAG*UGGAGU

Length

15 nucleotides

Bulged bases

9K10|1|A|U|2353, 9K10|1|A|G|2354, 9K10|1|A|U|2355

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K10|1|A|A|2351
9K10|1|A|C|2352
9K10|1|A|U|2353
9K10|1|A|G|2354
9K10|1|A|U|2355
9K10|1|A|G|2356
9K10|1|A|A|2357
9K10|1|A|A|2358
9K10|1|A|G|2359
*
9K10|1|A|U|2378
9K10|1|A|G|2379
9K10|1|A|G|2380
9K10|1|A|A|2381
9K10|1|A|G|2382
9K10|1|A|U|2383

Current chains

Chain A

23S ribosomal RNA

Nearby chains