IL_9K32_002

3D structure

PDB id

9K32 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the NbaCas9-guide RNA-target DNA complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

ACG*CCAAACUAAAACU

Length

16 nucleotides

Bulged bases

9K32|1|B|C|85

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K32|1|B|A|84
9K32|1|B|C|85
9K32|1|B|G|86
*
9K32|1|B|C|108
9K32|1|B|C|109
9K32|1|B|A|110
9K32|1|B|A|111
9K32|1|B|A|112
9K32|1|B|C|113
9K32|1|B|U|114
9K32|1|B|A|115
9K32|1|B|A|116
9K32|1|B|A|117
9K32|1|B|A|118
9K32|1|B|C|119
9K32|1|B|U|120

Current chains

Chain B

Guide RNA

Nearby chains

Chain A

HNH nuclease domain-containing protein