IL_9KDT_222
3D structure
- PDB id
- 9KDT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- ACU*AUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KDT|1|S2|A|1538
9KDT|1|S2|C|1539
9KDT|1|S2|U|1540
*
9KDT|1|S2|A|1595
9KDT|1|S2|U|1596
9KDT|1|S2|U|1597
Current chains
- Chain S2
- Mus musculus 18S ribosomal RNA
Nearby chains
- Chain SF
- Small ribosomal subunit protein uS7
- Chain SS
- Small ribosomal subunit protein uS13
- Chain ST
- Small ribosomal subunit protein eS19
- Chain SZ
- Small ribosomal subunit protein eS25
Coloring options: