IL_9KDU_032

3D structure

PDB id

9KDU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

GAAGGUGG*UGUUACAGC

Length

17 nucleotides

Bulged bases

9KDU|1|L5|G|756, 9KDU|1|L5|C|816

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9KDU|1|L5|G|753
9KDU|1|L5|A|754
9KDU|1|L5|A|755
9KDU|1|L5|G|756
9KDU|1|L5|G|757
9KDU|1|L5|U|758
9KDU|1|L5|G|759
9KDU|1|L5|G|760
*
9KDU|1|L5|U|811
9KDU|1|L5|G|812
9KDU|1|L5|U|813
9KDU|1|L5|U|814
9KDU|1|L5|A|815
9KDU|1|L5|C|816
9KDU|1|L5|A|817
9KDU|1|L5|G|818
9KDU|1|L5|C|819

Current chains

Chain L5

Mus musculus 28S ribosomal RNA

Nearby chains

Chain LM

Large ribosomal subunit protein eL14

Chain LS

Large ribosomal subunit protein eL20