IL_9KDW_138

3D structure

PDB id

9KDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.67 Å

Loop

Sequence

CGAAG*CUG

Length

8 nucleotides

Bulged bases

9KDW|1|L5|A|4394, 9KDW|1|L5|A|4395

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9KDW|1|L5|C|4392
9KDW|1|L5|G|4393
9KDW|1|L5|A|4394
9KDW|1|L5|A|4395
9KDW|1|L5|G|4396
*
9KDW|1|L5|C|4606
9KDW|1|L5|U|4607
9KDW|1|L5|G|4608

Current chains

Chain L5

Mus musculus 28S ribosomal RNA

Nearby chains