IL_9KDW_184
3D structure
- PDB id
- 9KDW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- GAAAAAAUUA*UACCGCAGC
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KDW|1|S2|G|808
9KDW|1|S2|A|809
9KDW|1|S2|A|810
9KDW|1|S2|A|811
9KDW|1|S2|A|812
9KDW|1|S2|A|813
9KDW|1|S2|A|814
9KDW|1|S2|U|815
9KDW|1|S2|U|816
9KDW|1|S2|A|817
*
9KDW|1|S2|U|849
9KDW|1|S2|A|850
9KDW|1|S2|C|851
9KDW|1|S2|C|852
9KDW|1|S2|G|853
9KDW|1|S2|C|854
9KDW|1|S2|A|855
9KDW|1|S2|G|856
9KDW|1|S2|C|857
Current chains
- Chain S2
- Mus musculus 18S ribosomal RNA
Nearby chains
- Chain SE
- Small ribosomal subunit protein eS4
- Chain SJ
- Small ribosomal subunit protein uS4
- Chain SL
- Small ribosomal subunit protein uS17
- Chain SW
- Small ribosomal subunit protein uS8
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