IL_9KDW_195
3D structure
- PDB id
- 9KDW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- CGA*UCUUUGG
- Length
- 10 nucleotides
- Bulged bases
- 9KDW|1|S2|C|1154, 9KDW|1|S2|U|1156, 9KDW|1|S2|G|1158
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KDW|1|S2|C|1092
9KDW|1|S2|G|1093
9KDW|1|S2|A|1094
*
9KDW|1|S2|U|1153
9KDW|1|S2|C|1154
9KDW|1|S2|U|1155
9KDW|1|S2|U|1156
9KDW|1|S2|U|1157
9KDW|1|S2|G|1158
9KDW|1|S2|G|1159
Current chains
- Chain S2
- Mus musculus 18S ribosomal RNA
Nearby chains
- Chain SC
- Small ribosomal subunit protein uS5
- Chain SL
- Small ribosomal subunit protein uS17
- Chain SN
- Small ribosomal subunit protein uS15
- Chain SW
- Small ribosomal subunit protein uS8
- Chain SX
- Small ribosomal subunit protein uS12
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