IL_9KMT_057

3D structure

PDB id

9KMT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bat SARSr-CoV RaTG15 Nsp1 bound to the Human 40S Ribosomal subunit-State1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.81 Å

Loop

Sequence

UGG*CGA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9KMT|1|2|U|1347
9KMT|1|2|G|1348
9KMT|1|2|G|1349
*
9KMT|1|2|C|1380
9KMT|1|2|G|1381
9KMT|1|2|A|1382

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain A

Small ribosomal subunit protein uS2

Chain C

Small ribosomal subunit protein uS5

Chain D

Small ribosomal subunit protein uS3

Chain R

Small ribosomal subunit protein eS17