IL_9KMU_017
3D structure
- PDB id
- 9KMU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bat SARSr-CoV RaTG15 Nsp1 bound to the Human 40S Ribosomal subunit-State2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- GAUC*GAC
- Length
- 7 nucleotides
- Bulged bases
- 9KMU|1|2|A|313
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9KMU_017 not in the Motif Atlas
- Geometric match to IL_7A0S_092
- Geometric discrepancy: 0.2892
- The information below is about IL_7A0S_092
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_55553.3
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
9KMU|1|2|G|312
9KMU|1|2|A|313
9KMU|1|2|U|314
9KMU|1|2|C|315
*
9KMU|1|2|G|335
9KMU|1|2|A|336
9KMU|1|2|C|337
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain E
- Small ribosomal subunit protein eS4, X isoform
- Chain G
- Small ribosomal subunit protein eS6
Coloring options: