IL_9KMV_063

3D structure

PDB id

9KMV (explore in PDB, NAKB, or RNA 3D Hub)

Description

SARSr-MpCoV-GX Nsp1 bound to the Human 40S Ribosomal subunit-State1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GGGAUCG*CAUGAAC

Length

14 nucleotides

Bulged bases

9KMV|1|2|A|1630, 9KMV|1|2|G|1632, 9KMV|1|2|A|1634

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9KMV|1|2|G|1604
9KMV|1|2|G|1605
9KMV|1|2|G|1606
9KMV|1|2|A|1607
9KMV|1|2|U|1608
9KMV|1|2|C|1609
9KMV|1|2|G|1610
*
9KMV|1|2|C|1629
9KMV|1|2|A|1630
9KMV|1|2|U|1631
9KMV|1|2|G|1632
9KMV|1|2|A|1633
9KMV|1|2|A|1634
9KMV|1|2|C|1635

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain P

Small ribosomal subunit protein uS19

Chain S

Small ribosomal subunit protein uS13

Chain T

Small ribosomal subunit protein eS19