IL_9KMZ_035
3D structure
- PDB id
- 9KMZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bat MERSr-CoV NL140422 Nsp1 bound to the Human 40S Ribosomal subunit-State1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- GCU*AAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9KMZ_035 not in the Motif Atlas
- Homologous match to IL_9PN5_175
- Geometric discrepancy: 0.0632
- The information below is about IL_9PN5_175
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.7
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 240
Unit IDs
9KMZ|1|2|G|673
9KMZ|1|2|C|674
9KMZ|1|2|U|675
*
9KMZ|1|2|A|1030
9KMZ|1|2|A|1031
9KMZ|1|2|C|1032
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain N
- Small ribosomal subunit protein uS15
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