IL_9KN5_066
3D structure
- PDB id
- 9KN5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 40S ribosome complexed with HCV IRES, eIF1A and eIF3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- ACAGGAUUG*CUCGAUU
- Length
- 16 nucleotides
- Bulged bases
- 9KN5|1|S2|G|1285, 9KN5|1|S2|U|1314
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KN5|1|S2|A|1282
9KN5|1|S2|C|1283
9KN5|1|S2|A|1284
9KN5|1|S2|G|1285
9KN5|1|S2|G|1286
9KN5|1|S2|A|1287
9KN5|1|S2|U|1288
9KN5|1|S2|U|1289
9KN5|1|S2|G|1290
*
9KN5|1|S2|C|1309
9KN5|1|S2|U|1310
9KN5|1|S2|C|1311
9KN5|1|S2|G|1312
9KN5|1|S2|A|1313
9KN5|1|S2|U|1314
9KN5|1|S2|U|1315
Current chains
- Chain S2
- Chains: S2
Nearby chains
- Chain SK
- 40S ribosomal protein S10
- Chain Sd
- 40S ribosomal protein S29
- Chain Sf
- 40S ribosomal protein S12
- Chain sh
- Ubiquitin-40S ribosomal protein S27a
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