IL_9KN5_107

3D structure

PDB id

9KN5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 40S ribosome complexed with HCV IRES, eIF1A and eIF3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGACCG*CGCUCAAUG

Length

15 nucleotides

Bulged bases

9KN5|1|zz|U|212, 9KN5|1|zz|U|216

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9KN5|1|zz|C|183
9KN5|1|zz|G|184
9KN5|1|zz|A|185
9KN5|1|zz|C|186
9KN5|1|zz|C|187
9KN5|1|zz|G|188
*
9KN5|1|zz|C|209
9KN5|1|zz|G|210
9KN5|1|zz|C|211
9KN5|1|zz|U|212
9KN5|1|zz|C|213
9KN5|1|zz|A|214
9KN5|1|zz|A|215
9KN5|1|zz|U|216
9KN5|1|zz|G|217

Current chains

Chain zz

Chains: zz

Nearby chains

Chain 3a

Eukaryotic translation initiation factor 3 subunit A