IL_9KZX_100
3D structure
- PDB id
- 9KZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (rotated state) in complexed with eIF3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UGGAAUG*CGAGAGA
- Length
- 14 nucleotides
- Bulged bases
- 9KZX|1|L5|U|2661, 9KZX|1|L5|A|2674
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KZX|1|L5|U|2656
9KZX|1|L5|G|2657
9KZX|1|L5|G|2658
9KZX|1|L5|A|2659
9KZX|1|L5|A|2660
9KZX|1|L5|U|2661
9KZX|1|L5|G|2662
*
9KZX|1|L5|C|2672
9KZX|1|L5|G|2673
9KZX|1|L5|A|2674
9KZX|1|L5|G|2675
9KZX|1|L5|A|2676
9KZX|1|L5|G|2677
9KZX|1|L5|A|2678
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain 3c
- Eukaryotic translation initiation factor 3 subunit C
- Chain LR
- 60S ribosomal protein L19
- Chain LZ
- 60S ribosomal protein L27
- Chain Lc
- 60S ribosomal protein L30
- Chain Lg
- 60S ribosomal protein L34
- Chain Lp
- 60S ribosomal protein L37a
- Chain SN
- 40S ribosomal protein S13
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