IL_9L0R_102

3D structure

PDB id

9L0R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Streptococcus agalactiae GOLLD RNA dodecamer

Experimental method

ELECTRON MICROSCOPY

Resolution

4.72 Å

Loop

Sequence

UUC*GAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9L0R_102 not in the Motif Atlas

Geometric match to IL_3R1D_014

Geometric discrepancy: 0.3646

The information below is about IL_3R1D_014

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.4

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

62

Unit IDs

9L0R|1|G|U|226
9L0R|1|G|U|227
9L0R|1|G|C|228
*
9L0R|1|G|G|243
9L0R|1|G|A|244
9L0R|1|G|G|245

Current chains

Chain G

RNA (700-MER)

Nearby chains