3D structure

PDB id
9L0R (explore in PDB, NAKB, or RNA 3D Hub)
Description
Streptococcus agalactiae GOLLD RNA dodecamer
Experimental method
ELECTRON MICROSCOPY
Resolution
4.72 Å

Loop

Sequence
CGAAG*CGAG
Length
9 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9L0R|1|J|C|136
9L0R|1|J|G|137
9L0R|1|J|A|138
9L0R|1|J|A|139
9L0R|1|J|G|140
*
9L0R|1|J|C|196
9L0R|1|J|G|197
9L0R|1|J|A|198
9L0R|1|J|G|199

Current chains

Chain J
RNA (700-MER)

Nearby chains

Chain K
Giant, ornate, lake- and Lactobacillales-derived (GOLLD) RNA

Coloring options:

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