IL_9LMF_029

3D structure

PDB id

9LMF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Streptococcus agalactiae GOLLD RNA 3' domain decamer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.93 Å

Loop

Sequence

AAGCAG*UUAAUU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9LMF|1|E|A|522
9LMF|1|E|A|523
9LMF|1|E|G|524
9LMF|1|E|C|525
9LMF|1|E|A|526
9LMF|1|E|G|527
*
9LMF|1|E|U|552
9LMF|1|E|U|553
9LMF|1|E|A|554
9LMF|1|E|A|555
9LMF|1|E|U|556
9LMF|1|E|U|557

Current chains

Chain E

RNA (700-MER)

Nearby chains

Chain G

Giant, ornate, lake- and Lactobacillales-derived (GOLLD) RNA