IL_9LMF_046

3D structure

PDB id

9LMF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Streptococcus agalactiae GOLLD RNA 3' domain decamer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.93 Å

Loop

Sequence

AAAGAGUAA*UGAAAAAU

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9LMF|1|H|A|514
9LMF|1|H|A|515
9LMF|1|H|A|516
9LMF|1|H|G|517
9LMF|1|H|A|518
9LMF|1|H|G|519
9LMF|1|H|U|520
9LMF|1|H|A|521
9LMF|1|H|A|522
*
9LMF|1|H|U|557
9LMF|1|H|G|558
9LMF|1|H|A|559
9LMF|1|H|A|560
9LMF|1|H|A|561
9LMF|1|H|A|562
9LMF|1|H|A|563
9LMF|1|H|U|564

Current chains

Chain H

RNA (700-MER)

Nearby chains