3D structure

PDB id
9M0P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of human 80S ribosome in complex with montanine
Experimental method
ELECTRON MICROSCOPY
Resolution
2.78 Å

Loop

Sequence
GAAAG*CUAGUAGC
Length
13 nucleotides
Bulged bases
9M0P|1|L5|A|1650, 9M0P|1|L5|G|1654
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9M0P|1|L5|G|1522
9M0P|1|L5|A|1523
9M0P|1|L5|A|1524
9M0P|1|L5|A|1525
9M0P|1|L5|G|1526
*
9M0P|1|L5|C|1648
9M0P|1|L5|U|1649
9M0P|1|L5|A|1650
9M0P|1|L5|G|1651
9M0P|1|L5|U|1652
9M0P|1|L5|A|1653
9M0P|1|L5|G|1654
9M0P|1|L5|C|1655

Current chains

Chain L5
28S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain LC
60S ribosomal protein L4
Chain LL
60S ribosomal protein L13
Chain LN
60S ribosomal protein L15
Chain La
60S ribosomal protein L27a
Chain Lj
60S ribosomal protein L37

Coloring options:

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