IL_9M0P_109

3D structure

PDB id

9M0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human 80S ribosome in complex with montanine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GGUGUAGAAUAAGUG*CACUAC

Length

21 nucleotides

Bulged bases

9M0P|1|L5|G|3958, 9M0P|1|L5|U|3959, 9M0P|1|L5|A|3962, 9M0P|1|L5|A|3963, 9M0P|1|L5|A|3965, 9M0P|1|L5|A|4053, 9M0P|1|L5|C|4054, 9M0P|1|L5|U|4055

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9M0P|1|L5|G|3955
9M0P|1|L5|G|3956
9M0P|1|L5|U|3957
9M0P|1|L5|G|3958
9M0P|1|L5|U|3959
9M0P|1|L5|A|3960
9M0P|1|L5|G|3961
9M0P|1|L5|A|3962
9M0P|1|L5|A|3963
9M0P|1|L5|U|3964
9M0P|1|L5|A|3965
9M0P|1|L5|A|3966
9M0P|1|L5|G|3967
9M0P|1|L5|U|3968
9M0P|1|L5|G|3969
*
9M0P|1|L5|C|4052
9M0P|1|L5|A|4053
9M0P|1|L5|C|4054
9M0P|1|L5|U|4055
9M0P|1|L5|A|4056
9M0P|1|L5|C|4057

Current chains

Chain L5

28S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain S6

HUMAN INITIATOR MET-TRNA-I|HOMO SAPIENS