IL_9M0P_110

3D structure

PDB id

9M0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human 80S ribosome in complex with montanine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GGGAGG*CCGCCGGUGAAAUACC

Length

22 nucleotides

Bulged bases

9M0P|1|L5|C|4038, 9M0P|1|L5|G|4043, 9M0P|1|L5|U|4044, 9M0P|1|L5|A|4046, 9M0P|1|L5|A|4047

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9M0P|1|L5|G|3969
9M0P|1|L5|G|3970
9M0P|1|L5|G|3971
9M0P|1|L5|A|3972
9M0P|1|L5|G|3973
9M0P|1|L5|G|3974
*
9M0P|1|L5|C|4037
9M0P|1|L5|C|4038
9M0P|1|L5|G|4039
9M0P|1|L5|C|4040
9M0P|1|L5|C|4041
9M0P|1|L5|G|4042
9M0P|1|L5|G|4043
9M0P|1|L5|U|4044
9M0P|1|L5|G|4045
9M0P|1|L5|A|4046
9M0P|1|L5|A|4047
9M0P|1|L5|A|4048
9M0P|1|L5|U|4049
9M0P|1|L5|A|4050
9M0P|1|L5|C|4051
9M0P|1|L5|C|4052

Current chains

Chain L5

28S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain S6

HUMAN INITIATOR MET-TRNA-I|HOMO SAPIENS