IL_9M0P_130
3D structure
- PDB id
- 9M0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of human 80S ribosome in complex with montanine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CCAU*AGGCG
- Length
- 9 nucleotides
- Bulged bases
- 9M0P|1|L5|C|4720
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9M0P_130 not in the Motif Atlas
- Homologous match to IL_9AXU_107
- Geometric discrepancy: 0.1422
- The information below is about IL_9AXU_107
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.5
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 50
Unit IDs
9M0P|1|L5|C|4582
9M0P|1|L5|C|4583
9M0P|1|L5|A|4584
9M0P|1|L5|U|4585
*
9M0P|1|L5|A|4717
9M0P|1|L5|G|4718
9M0P|1|L5|G|4719
9M0P|1|L5|C|4720
9M0P|1|L5|G|4721
Current chains
- Chain L5
- 28S ribosomal RNA|HOMO SAPIENS
Nearby chains
- Chain LB
- 60S ribosomal protein L3
- Chain LO
- 60S ribosomal protein L13a
Coloring options: