3D structure

PDB id
9M0P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of human 80S ribosome in complex with montanine
Experimental method
ELECTRON MICROSCOPY
Resolution
2.78 Å

Loop

Sequence
UCCUUUGGU*ACCCAUUCG
Length
18 nucleotides
Bulged bases
9M0P|1|S2|C|340, 9M0P|1|S2|A|343
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9M0P|1|S2|U|116
9M0P|1|S2|C|117
9M0P|1|S2|C|118
9M0P|1|S2|U|119
9M0P|1|S2|U|120
9M0P|1|S2|U|121
9M0P|1|S2|G|122
9M0P|1|S2|G|123
9M0P|1|S2|U|124
*
9M0P|1|S2|A|339
9M0P|1|S2|C|340
9M0P|1|S2|C|341
9M0P|1|S2|C|342
9M0P|1|S2|A|343
9M0P|1|S2|U|344
9M0P|1|S2|U|345
9M0P|1|S2|C|346
9M0P|1|S2|G|347

Current chains

Chain S2
18S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain SE
40S ribosomal protein S4, X isoform
Chain SG
40S ribosomal protein S6
Chain SI
40S ribosomal protein S8

Coloring options:

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