IL_9M0P_182

3D structure

PDB id

9M0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human 80S ribosome in complex with montanine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GAG*CGAGGAUC

Length

11 nucleotides

Bulged bases

9M0P|1|S2|A|587, 9M0P|1|S2|G|588, 9M0P|1|S2|A|590

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9M0P|1|S2|G|563
9M0P|1|S2|A|564
9M0P|1|S2|G|565
*
9M0P|1|S2|C|585
9M0P|1|S2|G|586
9M0P|1|S2|A|587
9M0P|1|S2|G|588
9M0P|1|S2|G|589
9M0P|1|S2|A|590
9M0P|1|S2|U|591
9M0P|1|S2|C|592

Current chains

Chain S2

18S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain SJ

40S ribosomal protein S9

Chain Se

40S ribosomal protein S30