3D structure

PDB id
9M0P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of human 80S ribosome in complex with montanine
Experimental method
ELECTRON MICROSCOPY
Resolution
2.78 Å

Loop

Sequence
GGACAGGAUUG*CUCGAUUC
Length
19 nucleotides
Bulged bases
9M0P|1|S2|G|1285, 9M0P|1|S2|U|1314
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9M0P|1|S2|G|1280
9M0P|1|S2|G|1281
9M0P|1|S2|A|1282
9M0P|1|S2|C|1283
9M0P|1|S2|A|1284
9M0P|1|S2|G|1285
9M0P|1|S2|G|1286
9M0P|1|S2|A|1287
9M0P|1|S2|U|1288
9M0P|1|S2|U|1289
9M0P|1|S2|G|1290
*
9M0P|1|S2|C|1309
9M0P|1|S2|U|1310
9M0P|1|S2|C|1311
9M0P|1|S2|G|1312
9M0P|1|S2|A|1313
9M0P|1|S2|U|1314
9M0P|1|S2|U|1315
9M0P|1|S2|C|1316

Current chains

Chain S2
18S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain SK
40S ribosomal protein S10

Coloring options:

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