IL_9MDS_032

3D structure

PDB id

9MDS (explore in PDB, NAKB, or RNA 3D Hub)

Description

ROOL RNA nanocage (env-120)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAA*UCAGAC

Length

9 nucleotides

Bulged bases

9MDS|1|C|G|580

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MDS|1|C|G|552
9MDS|1|C|A|553
9MDS|1|C|A|554
*
9MDS|1|C|U|577
9MDS|1|C|C|578
9MDS|1|C|A|579
9MDS|1|C|G|580
9MDS|1|C|A|581
9MDS|1|C|C|582

Current chains

Chain C

RNA (598-MER)

Nearby chains

Chain G

RNA (598-MER)