IL_9MDS_042

3D structure

PDB id

9MDS (explore in PDB, NAKB, or RNA 3D Hub)

Description

ROOL RNA nanocage (env-120)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAGAU*AAGCCC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MDS|1|D|G|292
9MDS|1|D|A|293
9MDS|1|D|A|294
9MDS|1|D|G|295
9MDS|1|D|A|296
9MDS|1|D|U|297
*
9MDS|1|D|A|319
9MDS|1|D|A|320
9MDS|1|D|G|321
9MDS|1|D|C|322
9MDS|1|D|C|323
9MDS|1|D|C|324

Current chains

Chain D

RNA (598-MER)

Nearby chains