IL_9MDS_048

3D structure

PDB id

9MDS (explore in PDB, NAKB, or RNA 3D Hub)

Description

ROOL RNA nanocage (env-120)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUACAAAA*UGAGUUAG

Length

16 nucleotides

Bulged bases

9MDS|1|E|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MDS|1|E|C|125
9MDS|1|E|U|126
9MDS|1|E|A|127
9MDS|1|E|C|128
9MDS|1|E|A|129
9MDS|1|E|A|130
9MDS|1|E|A|131
9MDS|1|E|A|132
*
9MDS|1|E|U|168
9MDS|1|E|G|169
9MDS|1|E|A|170
9MDS|1|E|G|171
9MDS|1|E|U|172
9MDS|1|E|U|173
9MDS|1|E|A|174
9MDS|1|E|G|175

Current chains

Chain E

RNA (598-MER)

Nearby chains