IL_9MEE_119

3D structure

PDB id

9MEE (explore in PDB, NAKB, or RNA 3D Hub)

Description

GOLLD RNA nanocage (env-38)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGUA*UUA

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MEE_119 not in the Motif Atlas

Geometric match to IL_8CRE_059

Geometric discrepancy: 0.3302

The information below is about IL_8CRE_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_51387.3

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

21

Unit IDs

9MEE|1|G|U|331
9MEE|1|G|G|332
9MEE|1|G|U|333
9MEE|1|G|A|334
*
9MEE|1|G|U|347
9MEE|1|G|U|348
9MEE|1|G|A|349

Current chains

Chain G

GOLLD RNA nanocage

Nearby chains