IL_9MEE_139
3D structure
- PDB id
- 9MEE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- GOLLD RNA nanocage (env-38)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAGU*ACC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9MEE_139 not in the Motif Atlas
- Geometric match to IL_4N0T_004
- Geometric discrepancy: 0.1987
- The information below is about IL_4N0T_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32983.3
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 9
Unit IDs
9MEE|1|H|G|363
9MEE|1|H|A|364
9MEE|1|H|G|365
9MEE|1|H|U|366
*
9MEE|1|H|A|375
9MEE|1|H|C|376
9MEE|1|H|C|377
Current chains
- Chain H
- GOLLD RNA nanocage
Nearby chains
- Chain I
- Giant, ornate, lake- and Lactobacillales-derived (GOLLD) RNA
Coloring options: