IL_9MEE_251

3D structure

PDB id

9MEE (explore in PDB, NAKB, or RNA 3D Hub)

Description

GOLLD RNA nanocage (env-38)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UCGAAAGGU*AAUAAGUAAG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MEE|1|N|U|637
9MEE|1|N|C|638
9MEE|1|N|G|639
9MEE|1|N|A|640
9MEE|1|N|A|641
9MEE|1|N|A|642
9MEE|1|N|G|643
9MEE|1|N|G|644
9MEE|1|N|U|645
*
9MEE|1|N|A|689
9MEE|1|N|A|690
9MEE|1|N|U|691
9MEE|1|N|A|692
9MEE|1|N|A|693
9MEE|1|N|G|694
9MEE|1|N|U|695
9MEE|1|N|A|696
9MEE|1|N|A|697
9MEE|1|N|G|698

Current chains

Chain N

GOLLD RNA nanocage

Nearby chains

Chain B

Giant, ornate, lake- and Lactobacillales-derived (GOLLD) RNA