3D structure

PDB id
9MME (explore in PDB, NAKB, or RNA 3D Hub)
Description
ROOLfirm-octamer-wild type
Experimental method
ELECTRON MICROSCOPY
Resolution
2.93 Å

Loop

Sequence
AAAAG*CAGAAUAU
Length
13 nucleotides
Bulged bases
9MME|1|g|U|526
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9MME|1|g|A|212
9MME|1|g|A|213
9MME|1|g|A|214
9MME|1|g|A|215
9MME|1|g|G|216
*
9MME|1|g|C|521
9MME|1|g|A|522
9MME|1|g|G|523
9MME|1|g|A|524
9MME|1|g|A|525
9MME|1|g|U|526
9MME|1|g|A|527
9MME|1|g|U|528

Current chains

Chain g
RNA (523-MER)

Nearby chains

No other chains within 10Å

Coloring options:

Copyright 2026 BGSU RNA group. Database contents are licensed under Creative Commons Attribution 4.0 International (CC BY 4.0). Page generated in 0.0438 s